HIV Target gene Detail Information

> OXSM Gene Search Result


Gene Information
Gene Name OXSM
Gene ID 54995
Gene Full Name 3-oxoacyl-ACP synthase, mitochondrial
Gene Alias KS; CEM1; KASI; FASN2D
Transcripts ENSG00000151093
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Mitochondria;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9NWU1
HGNC ID HGNC:26063
VEGA ID OTTHUMG00000130477
OMIM ID 610324
String ID 9606.ENSP00000280701
PharmGKB ID PA142671214
Target gene [OXSM] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4004644 chr3 23 18 41 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of OXSM expression and immune infiltrating cell level correlation result in HIV+ samples
OXSM expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).