HBV Target gene Detail Information

> OSTN Gene Search Result


Gene Information
Gene Name OSTN
Gene ID 344901
Gene Full Name osteocrin
Gene Alias MUSCLIN
Transcripts ENSG00000188729
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted secreted proteins
Uniport_ID P61366
HGNC ID HGNC:29961
VEGA ID OTTHUMG00000156190
OMIM ID 610280
String ID 9606.ENSP00000342356
PharmGKB ID PA134912892
Target gene [OSTN] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001960 chr3 308 51 38 397 View
1402958 chr3 308 51 38 397 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of OSTN expression and immune infiltrating cell level correlation result in HBV+ samples
OSTN expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).