HBV Target gene Detail Information

> OSCP1 Gene Search Result


Gene Information
Gene Name OSCP1
Gene ID 127700
Gene Full Name organic solute carrier partner 1
Gene Alias NOR1; C1orf102
Transcripts ENSG00000116885
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli;Nucleoplasm;Plasma membrane;
HPA Protein Class Info Predicted intracellular proteins, Transporters
Gene Function Suppressor gene
Uniport_ID Q8WVF1
HGNC ID HGNC:29971
VEGA ID OTTHUMG00000008139
OMIM ID 608854
String ID 9606.ENSP00000235532
PharmGKB ID PA165752125
Target gene [OSCP1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008287 chr1 15 5 1 21 View
1401737 chr1 15 5 1 21 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of OSCP1 expression and immune infiltrating cell level correlation result in HBV+ samples
OSCP1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).