HTLV1 Target gene Detail Information

> OR1F1 Gene Search Result

Gene Information

Gene Name	OR1F1
Gene ID	4992
Gene Full Name	olfactory receptor family 1 subfamily F member 1
Gene Alias	OLFMF; OR1F4; OR1F5; OR1F6; OR1F7; OR1F8; OR1F9; OR1F10; OR16-36; OR16-37; OR16-88; OR16-89; OR16-90; OR1F13P; OR3-145; ORL1023
Transcripts	ENSG00000168124
Virus	HTLV1
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	G-protein coupled receptors, Predicted membrane proteins
Uniport_ID	O43749
HGNC ID	HGNC:8194
VEGA ID	OTTHUMG00000133153
OMIM ID	603232
String ID	9606.ENSP00000305424
PharmGKB ID	PA32070

Target gene [OR1F1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6011835	chr16	24	1		25	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO)	HTLV-1 associated myelopathy	35	Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of OR1F1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
OR1F1 expression: Low -> High

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of OR1F1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
OR1F1 expression: Low -> High

> Dataset: GSE29332
HeatMap of cell type fractions in all samples	Lollipop of OR1F1 expression and immune infiltrating cell level correlation result in HTLV1+ samples
OR1F1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).