HIV Target gene Detail Information

> OPTN Gene Search Result


Gene Information
Gene Name OPTN
Gene ID 10133
Gene Full Name optineurin
Gene Alias NRP; FIP2; HIP7; HYPL; ALS12; GLC1E; TFIIIA-INTP
Transcripts ENSG00000123240
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q96CV9
HGNC ID HGNC:17142
VEGA ID OTTHUMG00000017690
OMIM ID 602432
String ID 9606.ENSP00000368022
PharmGKB ID PA31948
Target gene [OPTN] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4004489 chr10 27 16 43 View
4009197 chr10 12 12 View
4010543 chr10 8 8 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).