HBV Target gene Detail Information

> OPA1 Gene Search Result


Gene Information
Gene Name OPA1
Gene ID 4976
Gene Full Name OPA1, mitochondrial dynamin like GTPase
Gene Alias NPG; NTG; MGM1; BERHS; largeG; MTDPS14
Transcripts ENSG00000198836
Virus HBV
Gene Type protein coding
HPA Location Info Mitochondria;Nucleoplasm;
HPA Protein Class Info Disease related genes, Enzymes, Plasma proteins, Potential drug targets, Predicted intracellular proteins, Transporters
Uniport_ID O60313
HGNC ID HGNC:8140
VEGA ID OTTHUMG00000149897
OMIM ID 605290
String ID 9606.ENSP00000354681
PharmGKB ID PA31927
Target gene [OPA1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006232 chr3 34 7 41 View
1007110 chr3 25 5 30 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of OPA1 expression and immune infiltrating cell level correlation result in HBV+ samples
OPA1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).