HBV Target gene Detail Information

> OLFM3 Gene Search Result


Gene Information
Gene Name OLFM3
Gene ID 118427
Gene Full Name olfactomedin 3
Gene Alias NOE3; NOELIN3; OPTIMEDIN
Transcripts ENSG00000118733
Virus HBV
Gene Type protein coding
HPA Location Info Vesicles;Predicted to be secreted;
HPA Protein Class Info Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q96PB7
HGNC ID HGNC:17990
VEGA ID OTTHUMG00000010941
OMIM ID 607567
String ID 9606.ENSP00000345192
PharmGKB ID PA31917
Target gene [OLFM3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1018134 chr1 0 View
1019767 chr1 0 View
1400501 chr1 10 1 2 13 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of OLFM3 expression and immune infiltrating cell level correlation result in HBV+ samples
OLFM3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).