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HTLV1 Target gene Detail Information

> NUTF2 Gene Search Result


Gene Information
Gene Name NUTF2
Gene ID 10204
Gene Full Name nuclear transport factor 2
Gene Alias NTF2; PP15; NTF-2
Transcripts ENSG00000102898
Virus HTLV1
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID P61970
HGNC ID HGNC:13722
VEGA ID OTTHUMG00000137540
OMIM ID 605813
String ID 9606.ENSP00000219169
PharmGKB ID PA38365
Target gene [NUTF2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010693 chr16 20 10 30 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO) HTLV-1 associated myelopathy 39 Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO) HTLV-1 associated myelopathy 35 Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of NUTF2 expression and immune infiltrating cell level correlation result in HTLV1+ samples
NUTF2 expression: Low -> High

> Dataset: GSE29312

HeatMap of cell type fractions in all samples Lollipop of NUTF2 expression and immune infiltrating cell level correlation result in HTLV1+ samples
NUTF2 expression: Low -> High

> Dataset: GSE29332

HeatMap of cell type fractions in all samples Lollipop of NUTF2 expression and immune infiltrating cell level correlation result in HTLV1+ samples
NUTF2 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).