HIV Target gene Detail Information

> NUP98 Gene Search Result


Gene Information
Gene Name NUP98
Gene ID 4928
Gene Full Name nucleoporin 98
Gene Alias ADIR2; NUP96; NUP196
Transcripts ENSG00000110713
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Vesicles;
HPA Protein Class Info Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins
Gene Function Suppressor gene & Oncogene
Uniport_ID P52948
HGNC ID HGNC:8068
VEGA ID OTTHUMG00000011846
OMIM ID 601021
String ID 9606.ENSP00000316032
PharmGKB ID PA31856
Target gene [NUP98] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000862 chr11 61 30 176 267 View
4002857 chr11 75 2 77 View
4008595 chr11 12 2 14 View
4008867 chr11 12 1 13 View
4008994 chr11 11 2 13 View
4009205 chr11 12 12 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).