HPV Target gene Detail Information

> NUP54 Gene Search Result


Gene Information
Gene Name NUP54
Gene ID 53371
Gene Full Name nucleoporin 54
Transcripts ENSG00000138750
Virus HPV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Transporters
Uniport_ID Q7Z3B4
HGNC ID HGNC:17359
VEGA ID OTTHUMG00000130098
OMIM ID 607607
String ID 9606.ENSP00000264883
PharmGKB ID PA31853
Target gene [NUP54] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5401653 chr4 65 3 1 69 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).