HIV Target gene Detail Information

> NUP50 Gene Search Result


Gene Information
Gene Name NUP50
Gene ID 10762
Gene Full Name nucleoporin 50
Gene Alias NPAP60; NPAP60L
Transcripts ENSG00000093000
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Nuclear membrane;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Transporters
Uniport_ID Q9UKX7
HGNC ID HGNC:8065
VEGA ID OTTHUMG00000151265
OMIM ID 604646
String ID 9606.ENSP00000345895
PharmGKB ID PA31852
Target gene [NUP50] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4005790 chr22 28 1 29 View
4006756 chr22 20 3 23 View
4007353 chr22 19 1 20 View
4007923 chr22 17 17 View
4010594 chr22 7 1 8 View
4014451 chr22 2 2 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).