HTLV1 Target gene Detail Information

> NT5DC4 Gene Search Result


Gene Information
Gene Name NT5DC4
Gene ID 284958
Gene Full Name 5'-nucleotidase domain containing 4
Transcripts ENSG00000144130
Virus HTLV1
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q86YG4
HGNC ID HGNC:27678
VEGA ID OTTHUMG00000153308
String ID 9606.ENSP00000330247
PharmGKB ID PA143485563
Target gene [NT5DC4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004616 chr2 34 50 26 110 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of NT5DC4 expression and immune infiltrating cell level correlation result in HTLV1+ samples
NT5DC4 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).