HTLV1 Target gene Detail Information

> NT5DC4 Gene Search Result

Gene Information

Gene Name	NT5DC4
Gene ID	284958
Gene Full Name	5'-nucleotidase domain containing 4
Transcripts	ENSG00000144130
Virus	HTLV1
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q86YG4
HGNC ID	HGNC:27678
VEGA ID	OTTHUMG00000153308
String ID	9606.ENSP00000330247
PharmGKB ID	PA143485563

Target gene [NT5DC4] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6004616	chr2	34	50	26	110	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of NT5DC4 expression and immune infiltrating cell level correlation result in HTLV1+ samples
NT5DC4 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).