EBV Target gene Detail Information

> NSRP1 Gene Search Result


Gene Information
Gene Name NSRP1
Gene ID 84081
Gene Full Name nuclear speckle splicing regulatory protein 1
Gene Alias CCDC55; NSrp70; HSPC095
Transcripts ENSG00000126653
Virus EBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9H0G5
HGNC ID HGNC:25305
VEGA ID OTTHUMG00000132754
OMIM ID 616173
String ID 9606.ENSP00000247026
PharmGKB ID PA142672171
Target gene [NSRP1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000009 chr17 3448 231 317 3996 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE102203 (GEO) B-cell lymphoma 9 Plasmablastic lymphomas (EBV+)(6), Plasmablastic lymphomas (EBV-)(3)
GSE100458 (GEO) Burkitt lymphoma 14 Burkitt lyphoma cell line Akata(EBV+)(2),Burkitt lyphoma cell line Akata(EBV-)(2),Burkitt lyphoma cell line Awia(EBV+)(2),Burkitt lyphoma cell line Awia(EBV-)(2),Burkitt lyphoma cell line Eli(EBV+)(1),Burkitt lyphoma cell line Eli(EBV-)(1),Burkitt lyphoma cell line Mutu(EBV+)(2),Burkitt lyphoma cell line Mutu(EBV-)(2)
GSE42867 (GEO) Burkitt lymphoma 12 Burkitt lymphoma cell line Awia (EBV+)(12)
GSE12452 (GEO) Nasopharyngeal carcinoma 41 Nasopharyngeal carcinoma (EBV+)(31), Normal(10)

> Dataset: GSE102203

HeatMap of cell type fractions in all samples Lollipop of NSRP1 expression and immune infiltrating cell level correlation result in EBV+ samples
NSRP1 expression: Low -> High

> Dataset: GSE100458

HeatMap of cell type fractions in all samples Lollipop of NSRP1 expression and immune infiltrating cell level correlation result in EBV+ samples
NSRP1 expression: Low -> High

> Dataset: GSE42867

HeatMap of cell type fractions in all samples Lollipop of NSRP1 expression and immune infiltrating cell level correlation result in EBV+ samples
NSRP1 expression: Low -> High

> Dataset: GSE12452

HeatMap of cell type fractions in all samples Lollipop of NSRP1 expression and immune infiltrating cell level correlation result in EBV+ samples
NSRP1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).