HIV Target gene Detail Information

> NSMCE1 Gene Search Result


Gene Information
Gene Name NSMCE1
Gene ID 197370
Gene Full Name NSE1 homolog, SMC5-SMC6 complex component
Gene Alias NSE1
Transcripts ENSG00000169189
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Vesicles;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q8WV22
HGNC ID HGNC:29897
VEGA ID OTTHUMG00000131674
OMIM ID 617263
String ID 9606.ENSP00000355077
PharmGKB ID PA134943761
Target gene [NSMCE1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4002141 chr16 90 15 5 110 View
4003923 chr16 47 5 52 View
4006682 chr16 3 3 17 23 View
4012537 chr16 3 2 5 View
4013097 chr16 3 1 4 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).