HTLV1 Target gene Detail Information

> NRDE2 Gene Search Result


Gene Information
Gene Name NRDE2
Gene ID 55051
Gene Full Name NRDE-2, necessary for RNA interference, domain containing
Gene Alias C14orf102
Transcripts ENSG00000119720
Virus HTLV1
Gene Type protein coding
HPA Location Info Mitochondria;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9H7Z3
HGNC ID HGNC:20186
VEGA ID OTTHUMG00000171020
OMIM ID 618631
String ID 9606.ENSP00000346335
PharmGKB ID PA134926790
Target gene [NRDE2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6012694 chr14 18 3 21 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).