HIV Target gene Detail Information

> NPLOC4 Gene Search Result


Gene Information
Gene Name NPLOC4
Gene ID 55666
Gene Full Name NPL4 homolog, ubiquitin recognition factor
Gene Alias NPL4
Transcripts ENSG00000182446
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins, Transporters
Uniport_ID Q8TAT6
HGNC ID HGNC:18261
VEGA ID OTTHUMG00000177990
OMIM ID 606590
String ID 9606.ENSP00000331487
PharmGKB ID PA143485558
Target gene [NPLOC4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000317 chr17 486 43 21 550 View
4000791 chr17 273 7 280 View
4002938 chr17 72 2 74 View
4002939 chr17 72 2 74 View
4003286 chr17 58 5 1 64 View
4003807 chr17 25 29 54 View
4004707 chr17 33 7 40 View
4006309 chr17 19 2 4 25 View
4006876 chr17 19 3 22 View
4007878 chr17 16 1 17 View
4011135 chr17 4 3 7 View
4011220 chr17 4 3 7 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).