HIV Target gene Detail Information

> NPAT Gene Search Result

Gene Information

Gene Name	NPAT
Gene ID	4863
Gene Full Name	nuclear protein, coactivator of histone transcription
Gene Alias	E14; p220; E14/NPAT
Transcripts	ENSG00000149308
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear bodies;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q14207
HGNC ID	HGNC:7896
VEGA ID	OTTHUMG00000166385
OMIM ID	601448
String ID	9606.ENSP00000278612
PharmGKB ID	PA31697

Target gene [NPAT] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4009728	chr11	9	2		11	View
4010484	chr11	5	4		9	View
4015578	chr1	1			1	View
4016575	chr11				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of NPAT expression and immune infiltrating cell level correlation result in HIV+ samples
NPAT expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of NPAT expression and immune infiltrating cell level correlation result in HIV+ samples
NPAT expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).