HIV Target gene Detail Information

> NOP2 Gene Search Result

Gene Information

Gene Name	NOP2
Gene ID	4839
Gene Full Name	NOP2 nucleolar protein
Gene Alias	NOL1; p120; NSUN1; NOP120
Transcripts	ENSG00000111641
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoli;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	P46087
HGNC ID	HGNC:7867
VEGA ID	OTTHUMG00000169163
OMIM ID	164031
String ID	9606.ENSP00000371858
PharmGKB ID	PA164724026

Target gene [NOP2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002303	chr12	18	82		100	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of NOP2 expression and immune infiltrating cell level correlation result in HIV+ samples
NOP2 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of NOP2 expression and immune infiltrating cell level correlation result in HIV+ samples
NOP2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).