HBV Target gene Detail Information

> NOMO1 Gene Search Result


Gene Information
Gene Name NOMO1
Gene ID 23420
Gene Full Name NODAL modulator 1
Gene Alias PM5; Nomo
Transcripts ENSG00000274779
Virus HBV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q15155
HGNC ID HGNC:30060
VEGA ID OTTHUMG00000191094
OMIM ID 609157
String ID 9606.ENSP00000287667
Drugbank ID BE0008929
PharmGKB ID PA134934458
Target gene [NOMO1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1008779 chr16 19 19 View
1008780 chr16 19 19 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of NOMO1 expression and immune infiltrating cell level correlation result in HBV+ samples
NOMO1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).