EBV Target gene Detail Information

> NOCT Gene Search Result


Gene Information
Gene Name NOCT
Gene ID 25819
Gene Full Name nocturnin
Gene Alias NOC; CCR4L; Ccr4c; CCRN4L
Transcripts ENSG00000151014
Virus EBV
Gene Type protein coding
HPA Location Info Nuclear bodies;Cytosol;Nucleoplasm;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9UK39
HGNC ID HGNC:14254
VEGA ID OTTHUMG00000161271
OMIM ID 608468
PharmGKB ID PA26176
Target gene [NOCT] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000155 chr4 4 18 80 102 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE100458 (GEO) Burkitt lymphoma 14 Burkitt lyphoma cell line Akata(EBV+)(2),Burkitt lyphoma cell line Akata(EBV-)(2),Burkitt lyphoma cell line Awia(EBV+)(2),Burkitt lyphoma cell line Awia(EBV-)(2),Burkitt lyphoma cell line Eli(EBV+)(1),Burkitt lyphoma cell line Eli(EBV-)(1),Burkitt lyphoma cell line Mutu(EBV+)(2),Burkitt lyphoma cell line Mutu(EBV-)(2)

> Dataset: GSE100458

HeatMap of cell type fractions in all samples Lollipop of NOCT expression and immune infiltrating cell level correlation result in EBV+ samples
NOCT expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).