HIV Target gene Detail Information

> NLRP6 Gene Search Result

Gene Information

Gene Name	NLRP6
Gene ID	171389
Gene Full Name	NLR family pyrin domain containing 6
Gene Alias	AVR; NAVR; PAN3; NALP6; PYPAF5; CLR11.4; NAVR/AVR
Transcripts	ENSG00000174885
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	P59044
HGNC ID	HGNC:22944
VEGA ID	OTTHUMG00000119070
OMIM ID	609650
String ID	9606.ENSP00000309767
PharmGKB ID	PA162398002

Target gene [NLRP6] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4016158	chr11				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of NLRP6 expression and immune infiltrating cell level correlation result in HIV+ samples
NLRP6 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).