HBV Target gene Detail Information

> NLRP5 Gene Search Result


Gene Information
Gene Name NLRP5
Gene ID 126206
Gene Full Name NLR family pyrin domain containing 5
Gene Alias MATER; NALP5; PAN11; PYPAF8; CLR19.8
Transcripts ENSG00000171487
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID P59047
HGNC ID HGNC:21269
VEGA ID OTTHUMG00000149887
OMIM ID 609658
String ID 9606.ENSP00000375063
PharmGKB ID PA162397970
Target gene [NLRP5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1015339 chr19 1 1 2 View
1400858 chr19 1 1 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of NLRP5 expression and immune infiltrating cell level correlation result in HBV+ samples
NLRP5 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).