HIV Target gene Detail Information

> NLRC5 Gene Search Result


Gene Information
Gene Name NLRC5
Gene ID 84166
Gene Full Name NLR family CARD domain containing 5
Gene Alias NOD4; NOD27; CLR16.1
Transcripts ENSG00000140853
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Centrosome;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q86WI3
HGNC ID HGNC:29933
VEGA ID OTTHUMG00000133470
OMIM ID 613537
String ID 9606.ENSP00000262510
PharmGKB ID PA162397694
Target gene [NLRC5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000064 chr16 463 401 565 1429 View
4000373 chr16 99 242 164 505 View
4002415 chr16 89 6 95 View
4005418 chr16 32 1 33 View
4005602 chr16 19 5 7 31 View
4007503 chr16 15 4 19 View
4007552 chr16 14 5 19 View
4008485 chr16 9 3 3 15 View
4010194 chr16 7 2 9 View
4010292 chr16 7 2 9 View
4011576 chr16 4 2 6 View
4011710 chr16 4 2 6 View
4012245 chr16 5 5 View
4012246 chr16 3 1 1 5 View
4012588 chr16 4 1 5 View
4013308 chr16 3 1 4 View
4014094 chr16 2 2 View
4016607 chr16 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).