HIV Target gene Detail Information

> NEMF Gene Search Result

Gene Information

Gene Name	NEMF
Gene ID	9147
Gene Full Name	nuclear export mediator factor
Gene Alias	NY-CO-1; SDCCAG1
Transcripts	ENSG00000165525
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoplasm;Nuclear bodies;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	O60524
HGNC ID	HGNC:10663
VEGA ID	OTTHUMG00000170857
OMIM ID	608378
String ID	9606.ENSP00000298310
PharmGKB ID	PA35593

Target gene [NEMF] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008672	chr14	6	8		14	View
4008763	chr14	10	4		14	View
4013154	chr14	3	1		4	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of NEMF expression and immune infiltrating cell level correlation result in HIV+ samples
NEMF expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).