HPV Target gene Detail Information

> NELFE Gene Search Result

Gene Information

Gene Name	NELFE
Gene ID	7936
Gene Full Name	negative elongation factor complex member E
Gene Alias	RD; RDP; RDBP; D6S45; NELF-E
Transcripts	ENSG00000206268
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nuclear bodies;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	P18615
HGNC ID	HGNC:13974
VEGA ID	OTTHUMG00000004938
OMIM ID	154040
String ID	9606.ENSP00000364578
PharmGKB ID	PA134974984

Target gene [NELFE] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5001320	chr6	38			38	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE140662 (GEO)	Condyloma Acuminatum	8	Condyloma acuminata (HPV+)(5), Skin(3)

> Dataset: GSE140662
HeatMap of cell type fractions in all samples	Lollipop of NELFE expression and immune infiltrating cell level correlation result in HPV+ samples
NELFE expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).