HIV Target gene Detail Information

> NEAT1 Gene Search Result

Gene Information

Gene Name	NEAT1
Gene ID	283131
Gene Alias	VINC; TncRNA; LINC00084; NCRNA00084
Transcripts	ENSG00000245532
Virus	HIV
Gene Type	ncRNA
HPA Location Info
Gene Function	Oncogene
HGNC ID	HGNC:30815
VEGA ID	OTTHUMG00000166321
OMIM ID	612769
lncRNASNP2 ID	NONHSAG008670.2
PharmGKB ID	PA165543519

Target gene [NEAT1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000468	chr11	25	347	68	440	View
4001254	chr11	124	54	9	187	View
4002057	chr11	59	44	12	115	View
4002386	chr11	63	33		96	View
4002438	chr11	74	17	3	94	View
4004398	chr11	38	7		45	View
4004788	chr11	27	11	1	39	View
4005243	chr11	19	15		34	View
4005262	chr11	19	15		34	View
4006596	chr11	1	23		24	View
4007543	chr11	4	11	4	19	View
4009209	chr11	3	8	1	12	View
4011557	chr11	4	2		6	View
4011558	chr11	3	3		6	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).