HBV Target gene Detail Information

> NCAN Gene Search Result

Gene Information

Gene Name	NCAN
Gene ID	1463
Gene Full Name	neurocan
Gene Alias	CSPG3
Transcripts	ENSG00000130287
Virus	HBV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID	O14594
HGNC ID	HGNC:2465
VEGA ID	OTTHUMG00000182218
OMIM ID	600826
String ID	9606.ENSP00000252575
Drugbank ID	BE0004512
PharmGKB ID	PA162396986

Target gene [NCAN] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1006331	chr19	14	26		40	View
1008834	chr19	13	4	2	19	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of NCAN expression and immune infiltrating cell level correlation result in HBV+ samples
NCAN expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).