HIV Target gene Detail Information

> NBPF10 Gene Search Result

Gene Information

Gene Name	NBPF10
Gene ID	100132406
Gene Full Name	NBPF member 10
Gene Alias	AB6; AG1; NBPF9
Transcripts	ENSG00000271425
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear bodies;Nucleoplasm;
HPA Protein Class Info	Cancer-related genes, Predicted intracellular proteins
HGNC ID	HGNC:31992
VEGA ID	OTTHUMG00000013757
OMIM ID	614000
String ID	9606.ENSP00000463957
PharmGKB ID	PA142671290

Target gene [NBPF10] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001564	chr1	150			150	View
4005903	chr1	8	20		28	View
4009109	chr1	2	10		12	View
4011545	chr1	6			6	View
4013548	chr1	2	1		3	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of NBPF10 expression and immune infiltrating cell level correlation result in HIV+ samples
NBPF10 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).