HBV Target gene Detail Information

> NBEAL1 Gene Search Result


Gene Information
Gene Name NBEAL1
Gene ID 65065
Gene Full Name neurobeachin like 1
Gene Alias ALS2CR16; ALS2CR17; A530083I02Rik
Transcripts ENSG00000144426
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q6ZS30
HGNC ID HGNC:20681
VEGA ID OTTHUMG00000154129
OMIM ID 609816
String ID 9606.ENSP00000399903
PharmGKB ID PA24740
Target gene [NBEAL1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007246 chr2 2 12 15 29 View
1007253 chr2 22 2 5 29 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of NBEAL1 expression and immune infiltrating cell level correlation result in HBV+ samples
NBEAL1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).