HBV Target gene Detail Information

> NBAS Gene Search Result


Gene Information
Gene Name NBAS
Gene ID 51594
Gene Full Name neuroblastoma amplified sequence
Gene Alias NAG; SOPH; ILFS2
Transcripts ENSG00000151779
Virus HBV
Gene Type protein coding
HPA Location Info Golgi apparatus;Nuclear membrane;Nucleoli;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID A2RRP1
HGNC ID HGNC:15625
VEGA ID OTTHUMG00000121153
OMIM ID 608025
String ID 9606.ENSP00000281513
PharmGKB ID PA164723457
Target gene [NBAS] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005404 chr2 50 1 4 55 View
1008836 chr2 5 11 3 19 View
1015916 chr2 2 2 View
1017416 chr2 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of NBAS expression and immune infiltrating cell level correlation result in HBV+ samples
NBAS expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).