HIV Target gene Detail Information

> NARF Gene Search Result

Gene Information

Gene Name	NARF
Gene ID	26502
Gene Full Name	nuclear prelamin A recognition factor
Gene Alias	IOP2
Transcripts	ENSG00000141562
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Nucleoli;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9UHQ1
HGNC ID	HGNC:29916
VEGA ID	OTTHUMG00000178844
OMIM ID	605349
String ID	9606.ENSP00000309899
PharmGKB ID	PA142671294

Target gene [NARF] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002598	chr17	23	5	63	91	View
4007145	chr17	18	3		21	View
4010849	chr17	7	1		8	View
4011378	chr17	7			7	View
4013177	chr17	4			4	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of NARF expression and immune infiltrating cell level correlation result in HIV+ samples
NARF expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of NARF expression and immune infiltrating cell level correlation result in HIV+ samples
NARF expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).