HTLV1 Target gene Detail Information

> NAPSB Gene Search Result

Gene Information

Gene Name	NAPSB
Gene ID	256236
Gene Alias	NAP2; NAPB; NAP1L; NAPSBP
Transcripts	ENSG00000131401
Virus	HTLV1
Gene Type	pseudo
HPA Location Info
HGNC ID	HGNC:13396
VEGA ID	OTTHUMG00000166192
PharmGKB ID	PA134924106

Target gene [NAPSB] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6008549	chr19	43	1		44	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO)	HTLV-1 associated myelopathy	35	Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of NAPSB expression and immune infiltrating cell level correlation result in HTLV1+ samples
NAPSB expression: Low -> High

> Dataset: GSE29332
HeatMap of cell type fractions in all samples	Lollipop of NAPSB expression and immune infiltrating cell level correlation result in HTLV1+ samples
NAPSB expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).