HBV Target gene Detail Information

> NACC2 Gene Search Result


Gene Information
Gene Name NACC2
Gene ID 138151
Gene Full Name NACC family member 2
Gene Alias RBB; BEND9; NAC-2; BTBD14; BTBD31; BTBD14A
Transcripts ENSG00000148411
Virus HBV
Gene Type protein coding
HPA Location Info Mitochondria;Nucleoli;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q96BF6
HGNC ID HGNC:23846
VEGA ID OTTHUMG00000020921
OMIM ID 615786
String ID 9606.ENSP00000277554
PharmGKB ID PA164723421
Target gene [NACC2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006362 chr9 37 2 39 View
1400954 chr9 37 2 39 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of NACC2 expression and immune infiltrating cell level correlation result in HBV+ samples
NACC2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).