HTLV1 Target gene Detail Information

> MYOF Gene Search Result

Gene Information

Gene Name	MYOF
Gene ID	26509
Gene Full Name	myoferlin
Gene Alias	FER1L3
Transcripts	ENSG00000138119
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Vesicles;Plasma membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q9NZM1
HGNC ID	HGNC:3656
VEGA ID	OTTHUMG00000018772
OMIM ID	604603
String ID	9606.ENSP00000352208
PharmGKB ID	PA164723288

Target gene [MYOF] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6007459	chr10	7	40	8	55	View
6016501	chr10	2	4	6	12	View
6018159	chr10	1	5	3	9	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of MYOF expression and immune infiltrating cell level correlation result in HTLV1+ samples
MYOF expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).