HBV Target gene Detail Information

> MYH13 Gene Search Result


Gene Information
Gene Name MYH13
Gene ID 8735
Gene Full Name myosin heavy chain 13
Gene Alias MyHC-eo; MyHC-IIL
Transcripts ENSG00000006788
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9UKX3
HGNC ID HGNC:7571
VEGA ID OTTHUMG00000177987
OMIM ID 603487
String ID 9606.ENSP00000404570
PharmGKB ID PA31368
Target gene [MYH13] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006191 chr17 41 1 42 View
1006207 chr17 41 1 42 View
1009460 chr17 10 6 16 View
1013904 chr17 3 1 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of MYH13 expression and immune infiltrating cell level correlation result in HBV+ samples
MYH13 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).