HPV Target gene Detail Information

> MUC5B Gene Search Result


Gene Information
Gene Name MUC5B
Gene ID 727897
Gene Full Name mucin 5B, oligomeric mucus/gel-forming
Gene Alias MG1; MUC5; MUC9; MUC-5B
Transcripts ENSG00000117983
Virus HPV
Gene Type protein coding
HPA Location Info Vesicles;Predicted to be secreted;
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q9HC84
HGNC ID HGNC:7516
VEGA ID OTTHUMG00000166494
OMIM ID 600770
String ID 9606.ENSP00000436812
PharmGKB ID PA31321
Target gene [MUC5B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5402065 chr11 4 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
HNSC (TCGA) Head and Neck squamous cell carcinoma 566 Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: HNSC

HeatMap of cell type fractions in all samples Lollipop of MUC5B expression and immune infiltrating cell level correlation result in HPV+ samples
MUC5B expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).