HBV Target gene Detail Information

> MTA2 Gene Search Result


Gene Information
Gene Name MTA2
Gene ID 9219
Gene Full Name metastasis associated 1 family member 2
Gene Alias PID; MTA1L1
Transcripts ENSG00000149480
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID O94776
HGNC ID HGNC:7411
VEGA ID OTTHUMG00000167684
OMIM ID 603947
String ID 9606.ENSP00000278823
PharmGKB ID PA31219
Target gene [MTA2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000186 chr11 3546 876 168 4590 View
1000187 chr11 3546 876 168 4590 View
1000233 chr11 3397 298 21 3716 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of MTA2 expression and immune infiltrating cell level correlation result in HBV+ samples
MTA2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).