HTLV1 Target gene Detail Information

> MSH2 Gene Search Result

Gene Information

Gene Name	MSH2
Gene ID	4436
Gene Full Name	mutS homolog 2
Gene Alias	FCC1; COCA1; HNPCC; LCFS2; hMSH2; HNPCC1
Transcripts	ENSG00000095002
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Vesicles;
HPA Protein Class Info	Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins
Gene Function	Suppressor gene
Uniport_ID	P43246
HGNC ID	HGNC:7325
VEGA ID	OTTHUMG00000128861
OMIM ID	609309
String ID	9606.ENSP00000233146
PharmGKB ID	PA31133

Target gene [MSH2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6005084	chr2	85	8	1	94	View
6009062	chr2	39		1	40	View
6019615	chr2	6	2		8	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).