HIV Target gene Detail Information

> MRPL48 Gene Search Result

Gene Information

Gene Name	MRPL48
Gene ID	51642
Gene Full Name	mitochondrial ribosomal protein L48
Gene Alias	L48MT; CGI-118; HSPC290; MRP-L48
Transcripts	ENSG00000175581
Virus	HIV
Gene Type	protein coding
HPA Location Info	Mitochondria;
HPA Protein Class Info	Predicted intracellular proteins, Ribosomal proteins
Uniport_ID	Q96GC5
HGNC ID	HGNC:16653
VEGA ID	OTTHUMG00000168048
OMIM ID	611853
String ID	9606.ENSP00000308717
PharmGKB ID	PA30980

Target gene [MRPL48] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4012149	chr11	2	3		5	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of MRPL48 expression and immune infiltrating cell level correlation result in HIV+ samples
MRPL48 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of MRPL48 expression and immune infiltrating cell level correlation result in HIV+ samples
MRPL48 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).