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HBV Target gene Detail Information

> MRPL47 Gene Search Result


Gene Information
Gene Name MRPL47
Gene ID 57129
Gene Full Name mitochondrial ribosomal protein L47
Gene Alias NCM1; L47mt; CGI-204; MRP-L47
Transcripts ENSG00000136522
Virus HBV
Gene Type protein coding
HPA Location Info Mitochondria;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Ribosomal proteins
Uniport_ID Q9HD33
HGNC ID HGNC:16652
VEGA ID OTTHUMG00000157784
OMIM ID 611852
String ID 9606.ENSP00000417602
PharmGKB ID PA30979
Target gene [MRPL47] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004888 chr3 56 11 67 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of MRPL47 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
MRPL47 expression: Low -> High
Lollipop of MRPL47 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of MRPL47 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of MRPL47 expression and immune infiltrating cell level correlation result in HBV+ samples
MRPL47 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).