HIV Target gene Detail Information

> MRPL20 Gene Search Result

Gene Information

Gene Name	MRPL20
Gene ID	55052
Gene Full Name	mitochondrial ribosomal protein L20
Gene Alias	L20mt; MRP-L20
Transcripts	ENSG00000242485
Virus	HIV
Gene Type	protein coding
HPA Location Info	Mitochondria;
HPA Protein Class Info	Predicted intracellular proteins, Ribosomal proteins
Uniport_ID	Q9BYC9
HGNC ID	HGNC:14478
VEGA ID	OTTHUMG00000002916
OMIM ID	611833
String ID	9606.ENSP00000341082
PharmGKB ID	PA30950

Target gene [MRPL20] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005375	chr1	33			33	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of MRPL20 expression and immune infiltrating cell level correlation result in HIV+ samples
MRPL20 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of MRPL20 expression and immune infiltrating cell level correlation result in HIV+ samples
MRPL20 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).