HIV Target gene Detail Information

> MIDN Gene Search Result

Gene Information

Gene Name	MIDN
Gene ID	90007
Gene Full Name	midnolin
Transcripts	ENSG00000167470
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q504T8
HGNC ID	HGNC:16298
VEGA ID	OTTHUMG00000180144
OMIM ID	606700
String ID	9606.ENSP00000300952
PharmGKB ID	PA30818

Target gene [MIDN] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002568	chr19	82	7		89	View
4003089	chr19	54	16		70	View
4003753	chr19	55			55	View
4003915	chr19	40	12		52	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of MIDN expression and immune infiltrating cell level correlation result in HIV+ samples
MIDN expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of MIDN expression and immune infiltrating cell level correlation result in HIV+ samples
MIDN expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).