HIV Target gene Detail Information

> MICAL1 Gene Search Result

Gene Information

Gene Name	MICAL1
Gene ID	64780
Gene Full Name	microtubule associated monooxygenase, calponin and LIM domain containing 1
Gene Alias	MICAL; NICAL; MICAL-1
Transcripts	ENSG00000135596
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q8TDZ2
HGNC ID	HGNC:20619
VEGA ID	OTTHUMG00000015350
OMIM ID	607129
String ID	9606.ENSP00000351664
PharmGKB ID	PA134900249

Target gene [MICAL1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4003255	chr6	35	30		65	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of MICAL1 expression and immune infiltrating cell level correlation result in HIV+ samples
MICAL1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of MICAL1 expression and immune infiltrating cell level correlation result in HIV+ samples
MICAL1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).