HBV Target gene Detail Information

> MGAT4C Gene Search Result


Gene Information
Gene Name MGAT4C
Gene ID 25834
Gene Full Name MGAT4 family member C
Gene Alias GNTIVH; HGNT-IV-H
Transcripts ENSG00000283530
Virus HBV
Gene Type protein coding
HPA Location Info Plasma membrane;Vesicles;Centriolar satellite;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Predicted membrane proteins
Uniport_ID Q9UBM8
HGNC ID HGNC:30871
VEGA ID OTTHUMG00000169846
OMIM ID 607385
String ID 9606.ENSP00000481096
PharmGKB ID PA143485535
Target gene [MGAT4C] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012629 chr12 4 2 6 View
1012732 chr12 4 2 6 View
1017525 chr12 0 View
1018140 chr12 0 View
1019035 chr12 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of MGAT4C expression and immune infiltrating cell level correlation result in HBV+ samples
MGAT4C expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).