HBV Target gene Detail Information

> ME1 Gene Search Result


Gene Information
Gene Name ME1
Gene ID 4199
Gene Full Name malic enzyme 1
Gene Alias MES; HUMNDME
Transcripts ENSG00000065833
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Plasma membrane;Cytosol;
HPA Protein Class Info Enzymes, Plasma proteins, Predicted intracellular proteins
Uniport_ID P48163
HGNC ID HGNC:6983
VEGA ID OTTHUMG00000015111
OMIM ID 154250
String ID 9606.ENSP00000358719
Drugbank ID BE0000604
PharmGKB ID PA30723
Target gene [ME1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003468 chr6 114 17 131 View
1006146 chr20 35 5 2 42 View
1006572 chr20 33 2 1 36 View
1017611 chr6 0 View
1018280 chr6 0 View
1018281 chr6 0 View
1401384 chr20 35 5 2 42 View
1401385 chr20 33 2 1 36 View
1403921 chr6 0 View
1403922 chr6 114 17 131 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ME1 expression and immune infiltrating cell level correlation result in HBV+ samples
ME1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).