HIV Target gene Detail Information

> MATR3 Gene Search Result

Gene Information

Gene Name	MATR3
Gene ID	9782
Gene Full Name	matrin 3
Gene Alias	MPD2; ALS21; VCPDM
Transcripts	ENSG00000280987
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	P43243
HGNC ID	HGNC:6912
VEGA ID	OTTHUMG00000129229
OMIM ID	164015
String ID	9606.ENSP00000354346
PharmGKB ID	PA30655

Target gene [MATR3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004089	chr5	48	1		49	View
4004952	chr5	34	3		37	View
4007952	chr5	2	15		17	View
4009040	chr5	12	1		13	View
4010754	chr5	2	6		8	View
4012330	chr5	4	1		5	View
4300003	chr5	19	12		31	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of MATR3 expression and immune infiltrating cell level correlation result in HIV+ samples
MATR3 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of MATR3 expression and immune infiltrating cell level correlation result in HIV+ samples
MATR3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).