HBV Target gene Detail Information

> MAN1C1 Gene Search Result


Gene Information
Gene Name MAN1C1
Gene ID 57134
Gene Full Name mannosidase alpha class 1C member 1
Gene Alias HMIC; MAN1C; MAN1A3; pp6318
Transcripts ENSG00000117643
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9NR34
HGNC ID HGNC:19080
VEGA ID OTTHUMG00000004417
OMIM ID 616772
String ID 9606.ENSP00000363452
PharmGKB ID PA38788
Target gene [MAN1C1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1017278 chr1 1 1 View
1400476 chr1 24 4 28 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of MAN1C1 expression and immune infiltrating cell level correlation result in HBV+ samples
MAN1C1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).