HBV Target gene Detail Information

> LXN Gene Search Result


Gene Information
Gene Name LXN
Gene ID 56925
Gene Full Name latexin
Gene Alias ECI; TCI
Transcripts ENSG00000079257
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Gene Function Suppressor gene
Uniport_ID Q9BS40
HGNC ID HGNC:13347
VEGA ID OTTHUMG00000158807
OMIM ID 609305
String ID 9606.ENSP00000264265
PharmGKB ID PA134991999
Target gene [LXN] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000147 chr3 3302 936 1090 5328 View
1000148 chr3 3302 936 1090 5328 View
1000149 chr3 3302 936 1090 5328 View
1000150 chr3 3302 936 1090 5328 View
1000153 chr3 3300 931 1080 5311 View
1000154 chr3 3300 931 1080 5311 View
1000155 chr3 3301 927 1077 5305 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of LXN expression and immune infiltrating cell level correlation result in HBV+ samples
LXN expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).