HPV Target gene Detail Information

> LSMEM2 Gene Search Result


Gene Information
Gene Name LSMEM2
Gene ID 132228
Gene Full Name leucine rich single-pass membrane protein 2
Gene Alias C3orf45
Transcripts ENSG00000179564
Virus HPV
Gene Type protein coding
HPA Location Info Plasma membrane;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q8N112
HGNC ID HGNC:26781
VEGA ID OTTHUMG00000156938
String ID 9606.ENSP00000315081
PharmGKB ID PA143485322
Target gene [LSMEM2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5004223 chr3 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).