HPV Target gene Detail Information

> LSM3 Gene Search Result

Gene Information

Gene Name	LSM3
Gene ID	27258
Gene Full Name	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
Gene Alias	SMX4; USS2; YLR438C
Transcripts	ENSG00000170860
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nucleoli;Nucleoplasm;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	P62310
HGNC ID	HGNC:17874
VEGA ID	OTTHUMG00000129838
OMIM ID	607283
String ID	9606.ENSP00000302160
PharmGKB ID	PA134881991

Target gene [LSM3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5402403	chr3	13	5		18	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).